Pressure Cell Publications

Valdés, A., García-Cañas, V., Artemenko, K. A., Simo, C., Bergquist, J., & Cifuentes, A. (2016). Nano-liquid chromatography-orbitrap MS -based quantitative proteomics reveals differences between the mechanisms of action of carnosic acid and carnosol in colon cancer cells. Molecular & Cellular Proteomics, mcp.M116.061481. https://doi.org/10.1074/mcp.M116.061481

Musunuri, S., Khoonsari, P. E., Mikus, M., Wetterhall, M., Häggmark-Mänberg, A., Lannfelt, L., Erlandsson, A., Bergquist, J., Ingelsson, M., Shevchenko, G., Nilsson, P., & Kultima, K. (2016). Increased Levels of Extracellular Microvesicle Markers and Decreased Levels of Endocytic/Exocytic Proteins in the Alzheimer’s Disease Brain. Journal of Alzheimer’s Disease, 54(4), 1671–1686. https://doi.org/10.3233/JAD-160271

Khoonsari, P. E., Häggmark, A., Lönnberg, M., Mikus, M., Kilander, L., Lannfelt, L., Bergquist, J., Ingelsson, M., Nilsson, P., Kultima, K., & Shevchenko, G. (2016). Analysis of the Cerebrospinal Fluid Proteome in Alzheimer’s Disease. PLOS ONE, 11(3), e0150672. https://doi.org/10.1371/journal.pone.0150672

Warnecke, A., Musunuri, S., N’diaye, M., Sandalova, T., Achour, A., Bergquist, J., & Harris, R. A. (2016). Nitration of MOG diminishes its encephalitogenicity depending on MHC haplotype. Journal of Neuroimmunology. https://doi.org/10.1016/j.jneuroim.2016.11.008

Sargsyan, E., Artemenko, K., Manukyan, L., Bergquist, J., & Bergsten, P. (2016). Oleate protects beta-cells from the toxic effect of palmitate by activating pro-survival pathways of the ER stress response. Biochimica et Biophysica Acta (BBA) - Molecular and Cell Biology of Lipids, 1861(9), 1151–1160. https://doi.org/10.1016/j.bbalip.2016.06.012

Ross, E. E., Hoag, C., Pfeifer, Z., Lundeen, C., & Owens, S. (2016). Metal ion binding to phospholipid bilayers evaluated by microaffinity chromatography. Journal of Chromatography A, 1451, 75–82. https://doi.org/10.1016/j.chroma.2016.05.012

Engholm-Keller, K., & Larsen, M. R. (2016). Improving the Phosphoproteome Coverage for Limited Sample Amounts Using TiO2-SIMAC-HILIC (TiSH) Phosphopeptide Enrichment and Fractionation. In L. von Stechow (Ed.), Phospho-Proteomics (Vol. 1355, pp. 161–177). Springer New York. http://link.springer.com/10.1007/978-1-4939-3049-4_11

Richards, A. L., Hebert, A. S., Ulbrich, A., Bailey, D. J., Coughlin, E. E., Westphall, M. S., & Coon, J. J. (2015). One-hour proteome analysis in yeast. Nature Protocols, 10(5), 701–714. https://doi.org/10.1038/nprot.2015.040

Schey, K. L., Luther, J. M., & Rose, K. L. (2015). Proteomics characterization of exosome cargo. Methods. https://doi.org/10.1016/j.ymeth.2015.03.018

Musunuri, S., Kultima, K., Richard, B. C., Ingelsson, M., Lannfelt, L., Bergquist, J., & Shevchenko, G. (2015). Micellar extraction possesses a new advantage for the analysis of Alzheimer’s disease brain proteome. Analytical and Bioanalytical Chemistry, 407(4), 1041–1057. https://doi.org/10.1007/s00216-014-8320-8

Elf, K., Shevchenko, G., Nygren, I., Larsson, L., Bergquist, J., Askmark, H., & Artemenko, K. (2014). Alterations in muscle proteome of patients diagnosed with amyotrophic lateral sclerosis. Journal of Proteomics, 108, 55–64. https://doi.org/10.1016/j.jprot.2014.05.004

Levy, M. H., Goswami, S., Plawsky, J., & Cramer, S. M. (2013). Parameters Governing the Formation of Photopolymerized Silica Sol–Gel Monoliths in PDMS Microfluidic Chips. Chromatographia, 76(15–16), 993–1002. https://doi.org/10.1007/s10337-013-2493-8

Levy, M. H., Plawsky, J., & Cramer, S. M. (2013). Photopolymerized sol-gel monoliths for separations of glycosylated proteins and peptides in microfluidic chips: Other Techniques. Journal of Separation Science, 36(14), 2358–2365. https://doi.org/10.1002/jssc.201200990

Sjödin, M. O. D., Wetterhall, M., Kultima, K., & Artemenko, K. (2013). Comparative study of label and label-free techniques using shotgun proteomics for relative protein quantification. Journal of Chromatography B, 928, 83–92. https://doi.org/10.1016/j.jchromb.2013.03.027

Shevchenko, G., Wetterhall, M., Bergquist, J., Höglund, K., Andersson, L. I., & Kultima, K. (2012). Longitudinal Characterization of the Brain Proteomes for the Tg2576 Amyloid Mouse Model Using Shotgun Based Mass Spectrometry. Journal of Proteome Research, 121030111932006. https://doi.org/10.1021/pr300808h

Liao, Z., Wan, Y., Thomas, S. N., & Yang, A. J. (2012). IsoQuant: A Software Tool for Stable Isotope Labeling by Amino Acids in Cell Culture-Based Mass Spectrometry Quantitation. Analytical Chemistry, 84(10), 4535–4543. https://doi.org/10.1021/ac300510t

Martin, B., Chadwick, W., Yi, T., Park, S.-S., Lu, D., Ni, B., Gadkaree, S., Farhang, K., Becker, K. G., & Maudsley, S. (2012). VENNTURE–A Novel Venn Diagram Investigational Tool for Multiple Pharmacological Dataset Analysis. PLoS ONE, 7(5), e36911. https://doi.org/10.1371/journal.pone.0036911

Thomas, S. N., Wan, Y., Liao, Z., Hanson, P. I., & Yang, A. J. (2011). Stable Isotope Labeling with Amino Acids in Cell Culture Based Mass Spectrometry Approach to Detect Transient Protein Interactions Using Substrate Trapping. Analytical Chemistry, 83(14), 5511–5518. https://doi.org/10.1021/ac200950k

Park, S.-S., & Maudsley, S. (2011). Discontinuous pH gradient-mediated separation of TiO2-enriched phosphopeptides. Analytical Biochemistry, 409(1), 81–88. https://doi.org/10.1016/j.ab.2010.10.003

Lu, Q., & Collins, G. E. (2010). Lab on a chip packing of submicron particles for high performance EOF pumping. Journal of Chromatography A, 1217(45), 7153–7157. https://doi.org/10.1016/j.chroma.2010.09.009

Luo, Y., Yang, C., Jin, C., Xie, R., Wang, F., & McKeehan, W. L. (2009). Novel phosphotyrosine targets of FGFR2IIIb signaling. Cellular Signalling, 21(9), 1370–1378. https://doi.org/10.1016/j.cellsig.2009.04.004

Lu, Q., & Collins, G. E. (2009). A fritless, EOF microchip pump for high pressure pumping of aqueous and organic solvents. Lab on a Chip, 9(7), 954. https://doi.org/10.1039/b816291c

Lohrig, K., & Wolters, D. (2009). Multidimensional Protein Identification Technology. In J. Reinders & A. Sickmann (Eds.), Proteomics (Vol. 564, pp. 143–153). Humana Press. http://link.springer.com/10.1007/978-1-60761-157-8_8

Borowsky, J. F., Giordano, B. C., Lu, Q., Terray, A., & Collins, G. E. (2008). Electroosmotic Flow-Based Pump for Liquid Chromatography on a Planar Microchip. Analytical Chemistry, 80(21), 8287–8292. https://doi.org/10.1021/ac801497r