Bullet Blender Publications: Animal Tissue By Type

Useful references for common tissue types and systems. Adipose | Blood vessels | Bone, cartilage and skin | Brain and nerves | Eye tissues | Glandular tissue | Heart | Intestine and stomach | Kidney and other urinary organs | Liver, pancreas and spleen | Lung | Lymphatic tissue | Membranous tissue | Muscles, ligaments and tendons | Nasal tissues | Oral tissues (including teeth) | Reproductive organs and tissues| Tumors and other pathological tissues

Adipose

Blood vessels

Bone, cartilage and skin

Brain and nerves

Eye tissues

Glandular tissue

Heart

Malania, L., Bai, Y., Osikowicz, L. M., Tsertsvadze, N., Katsitadze, G., Imnadze, P., & Kosoy, M. (2016). Prevalence and Diversity of Bartonella Species in Rodents from Georgia (Caucasus). The American Journal of Tropical Medicine and Hygiene, 16–0041. https://doi.org/10.4269/ajtmh.16-0041
Zhang, F., Hartnett, S., Sample, A., Schnack, S., & Li, Y. (2016). High fat diet induced alterations of atrial electrical activities in mice. American Journal of Cardiovascular Disease, 6(1), 1–9. http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4788723/
Hernandez-Anzaldo, S., Berry, E., Brglez, V., Leung, D., Yun, T. J., Lee, J. S., Filep, J. G., Kassiri, Z., Cheong, C., Lambeau, G., Lehner, R., & Fernandez-Patron, C. (2015). Identification of a Novel Heart-Liver Axis: Matrix Metalloproteinase-2 Negatively Regulates Cardiac Secreted Phospholipase A2 to Modulate Lipid Metabolism and Inflammation in the Liver. Journal of the American Heart Association, 4(11), e002553–e002553. https://doi.org/10.1161/JAHA.115.002553
Falendysz, E. A., Lopera, J. G., Lorenzsonn, F., Salzer, J. S., Hutson, C. L., Doty, J., Gallardo-Romero, N., Carroll, D. S., Osorio, J. E., & Rocke, T. E. (2015). Further Assessment of Monkeypox Virus Infection in Gambian Pouched Rats (Cricetomys gambianus) Using In Vivo Bioluminescent Imaging. PLOS Neglected Tropical Diseases, 9(10), e0004130. https://doi.org/10.1371/journal.pntd.0004130
Pappas, C. T., Mayfield, R. M., Henderson, C., Jamilpour, N., Cover, C., Hernandez, Z., Hutchinson, K. R., Chu, M., Nam, K.-H., Valdez, J. M., Wong, P. K., Granzier, H. L., & Gregorio, C. C. (2015). Knockout of Lmod2 results in shorter thin filaments followed by dilated cardiomyopathy and juvenile lethality. Proceedings of the National Academy of Sciences, 201508273. https://doi.org/10.1073/pnas.1508273112
Sjögren, B., Swaney, S., & Neubig, R. R. (2015). FBXO44-Mediated Degradation of RGS2 Protein Uniquely Depends on a Cullin 4B/DDB1 Complex. PLOS ONE, 10(5), e0123581. https://doi.org/10.1371/journal.pone.0123581
Berry, E., Hernandez-Anzaldo, S., Ghomashchi, F., Lehner, R., Murakami, M., Gelb, M. H., Kassiri, Z., Wang, X., & Fernandez-Patron, C. (2015). Matrix Metalloproteinase-2 Negatively Regulates Cardiac Secreted Phospholipase A2 to Modulate Inflammation and Fever. Journal of the American Heart Association, 4(4), e001868–e001868. https://doi.org/10.1161/JAHA.115.001868
Schisler, J. C., Grevengoed, T. J., Pascual, F., Cooper, D. E., Ellis, J. M., Paul, D. S., Willis, M. S., Patterson, C., Jia, W., & Coleman, R. A. (2015). Cardiac Energy Dependence on Glucose Increases Metabolites Related to Glutathione and Activates Metabolic Genes Controlled by Mechanistic Target of Rapamycin. Journal of the American Heart Association, 4(2), e001136–e001136. https://doi.org/10.1161/JAHA.114.001136
Konhilas, J. P., Chen, H., Luczak, E., McKee, L. A., Regan, J., Watson, P. A., Stauffer, B. L., Khalpey, Z. I., Mckinsey, T. A., Horn, T., LaFleur, B., & Leinwand, L. A. (2015). Diet and sex modify exercise and cardiac adaptation in the mouse. AJP: Heart and Circulatory Physiology, 308(2), H135–H145. https://doi.org/10.1152/ajpheart.00532.2014
Doldur-Balli, F., Ozel, M. N., Gulsuner, S., Tekinay, A. B., Ozcelik, T., Konu, O., & Adams, M. M. (2015). Characterization of a novel zebrafish (Danio rerio) gene, wdr81, associated with cerebellar ataxia, mental retardation and dysequilibrium syndrome (CAMRQ). BMC Neuroscience, 16(1). https://doi.org/10.1186/s12868-015-0229-4
Koren, L., Alishekevitz, D., Elhanani, O., Nevelsky, A., Hai, T., Kehat, I., Shaked, Y., & Aronheim, A. (2015). ATF3-dependent cross-talk between cardiomyocytes and macrophages promotes cardiac maladaptive remodeling. International Journal of Cardiology, 198, 232–240. https://doi.org/10.1016/j.ijcard.2015.06.099
Manning, J. R., Withers, C. N., Levitan, B., Smith, J. D., Andres, D. A., & Satin, J. (2015). Loss of Rad-GTPase produces a novel adaptive cardiac phenotype resistant to systolic decline with aging. American Journal of Physiology – Heart and Circulatory Physiology, 309(8), H1336–H1345. https://doi.org/10.1152/ajpheart.00389.2015
Kolb, T. M., Peabody, J., Baddoura, P., Fallica, J., Mock, J. R., Singer, B. D., D’Alessio, F. R., Damarla, M., Damico, R. L., & Hassoun, P. M. (2015). Right ventricular angiogenesis is an early adaptive response to chronic hypoxia-induced pulmonary hypertension. Microcirculation, n/a-n/a. https://doi.org/10.1111/micc.12247
Hezel, M. P., Liu, M., Schiffer, T. A., Larsen, F. J., Checa, A., Wheelock, C. E., Carlström, M., Lundberg, J. O., & Weitzberg, E. (2015). Effects of long-term dietary nitrate supplementation in mice. Redox Biology, 5, 234–242. https://doi.org/10.1016/j.redox.2015.05.004
Neishabouri, S. H., Hutson, S. M., & Davoodi, J. (2015). Chronic activation of mTOR complex 1 by branched chain amino acids and organ hypertrophy. Amino Acids, 47(6), 1167–1182. https://doi.org/10.1007/s00726-015-1944-y
Mootz, J. M., Benson, M. A., Heim, C. E., Crosby, H. A., Kavanaugh, J. S., Dunman, P. M., Kielian, T., Torres, V. J., & Horswill, A. R. (2015). Rot is a key regulator of Staphylococcus aureus biofilm formation: Rot regulates S . aureus biofilm formation. Molecular Microbiology, 96(2), 388–404. https://doi.org/10.1111/mmi.12943
Lemon, D. D., Harrison, B. C., Horn, T. R., Stratton, M. S., Ferguson, B. S., Wempe, M. F., & McKinsey, T. A. (2015). Promiscuous actions of small molecule inhibitors of the protein kinase D-class IIa HDAC axis in striated muscle. FEBS Letters, 589(10), 1080–1088. https://doi.org/10.1016/j.febslet.2015.03.017
Eriksson, A., Williams, M. J., Voisin, S., Hansson, I., Krishnan, A., Philippot, G., Yamskova, O., Herisson, F. M., Dnyansagar, R., Moschonis, G., Manios, Y., Chrousos, G. P., Olszewski, P. K., Frediksson, R., & Schiöth, H. B. (2015). Implication of coronin 7 in body weight regulation in humans, mice and flies. BMC Neuroscience, 16(1), 13. https://doi.org/10.1186/s12868-015-0151-9
Zhang, Z., He, L., Hu, S., Wang, Y., Lai, Q., Yang, P., Yu, Q., Zhang, S., Xiong, F., Simsekyilmaz, S., Ning, Q., Li, J., Zhang, D., Zhang, H., Xiang, X., Zhou, Z., Sun, H., & Wang, C.-Y. (2015). AAL exacerbates pro-inflammatory response in macrophages by regulating Mincle/Syk/Card9 signaling along with the Nlrp3 inflammasome assembly. American Journal of Translational Research, 7(10), 1812–1825.
Song, B., Liu, Y., Parman, T., Liu, S., Miller, J. K., Liu, X., Tanga, M. J., & Mirsalis, J. (2014). Quantitative Proteomics for Cardiac Biomarker Discovery Using Isoproterenol-Treated Nonhuman Primates. Journal of Proteome Research, 13(12), 5909–5917. https://doi.org/10.1021/pr500835w
Drake, J. C., Bruns, D. R., Peelor, F. F., Biela, L. M., Miller, R. A., Hamilton, K. L., & Miller, B. F. (2014). Long-lived crowded-litter mice have an age-dependent increase in protein synthesis to DNA synthesis ratio and mTORC1 substrate phosphorylation. AJP: Endocrinology and Metabolism, 307(9), E813–E821. https://doi.org/10.1152/ajpendo.00256.2014
Ablorh, N.-A. D., Dong, X., James, Z. M., Xiong, Q., Zhang, J., Thomas, D. D., & Karim, C. B. (2014). Synthetic Phosphopeptides Enable Quantitation of the Content and Function of the Four Phosphorylation States of Phospholamban in Cardiac Muscle. Journal of Biological Chemistry, 289(42), 29397–29405. https://doi.org/10.1074/jbc.M114.556621
van der Plas-Duivesteijn, S. J., Mohammed, Y., Dalebout, H., Meijer, A., Botermans, A., Hoogendijk, J. L., Henneman, A. A., Deelder, A. M., Spaink, H. P., & Palmblad, M. (2014). Identifying Proteins in Zebrafish Embryos Using Spectral Libraries Generated from Dissected Adult Organs and Tissues. Journal of Proteome Research, 13(3), 1537–1544. https://doi.org/10.1021/pr4010585
Wang, X., Huang, W., Yang, Y., Wang, Y., Peng, T., Chang, J., Caldwell, C. C., Zingarelli, B., & Fan, G.-C. (2014). Loss of duplexmiR-223 (5p and 3p) aggravates myocardial depression and mortality in polymicrobial sepsis. Biochimica et Biophysica Acta (BBA) – Molecular Basis of Disease, 1842(5), 701–711. https://doi.org/10.1016/j.bbadis.2014.01.012
Williams, S. M., Golden-Mason, L., Ferguson, B. S., Schuetze, K. B., Cavasin, M. A., Demos-Davies, K., Yeager, M. E., Stenmark, K. R., & McKinsey, T. A. (2014). Class I HDACs regulate angiotensin II-dependent cardiac fibrosis via fibroblasts and circulating fibrocytes. Journal of Molecular and Cellular Cardiology, 67, 112–125. https://doi.org/10.1016/j.yjmcc.2013.12.013
Parra, S., Huang, X., Charbeneau, R. A., Wade, S. M., Kaur, K., Rorabaugh, B. R., & Neubig, R. R. (2014). Conditional disruption of interactions between Gαi2 and regulator of G protein signaling (RGS) proteins protects the heart from ischemic injury. BMC Pharmacology and Toxicology, 15(1), 29. https://doi.org/10.1186/2050-6511-15-29
Cavasin, M. A., Demos-Davies, K. M., Schuetze, K. B., Blakeslee, W. W., Stratton, M. S., Tuder, R. M., & McKinsey, T. A. (2014). Reversal of severe angioproliferative pulmonary arterial hypertension and right ventricular hypertrophy by combined phosphodiesterase-5 and endothelin receptor inhibition. Journal of Translational Medicine, 12(1), 314. https://doi.org/10.1186/s12967-014-0314-y
Melero, M., García-Párraga, D., Corpa, J., Ortega, J., Rubio-Guerri, C., Crespo, J., Rivera-Arroyo, B., & Sánchez-Vizcaíno, J. (2014). First molecular detection and characterization of herpesvirus and poxvirus in a Pacific walrus (Odobenus rosmarus divergens). BMC Veterinary Research, 10(1), 968. https://doi.org/10.1186/s12917-014-0308-2
Lassaletta, A. D., Elmadhun, N. Y., Burgess, T. A., Bianchi, C., Sabe, A. A., Robich, M. P., Chu, L. M., & Sellke, F. W. (2014). Microvascular Notch Signaling Is Upregulated in Response to Vascular Endothelial Growth Factor and Chronic Myocardial Ischemia. Circulation Journal, 78(3), 743–751. https://doi.org/10.1253/circj.CJ-13-0685
Drake, J. C., Peelor, F. F., Biela, L. M., Watkins, M. K., Miller, R. A., Hamilton, K. L., & Miller, B. F. (2013). Assessment of Mitochondrial Biogenesis and mTORC1 Signaling During Chronic Rapamycin Feeding in Male and Female Mice. The Journals of Gerontology Series A: Biological Sciences and Medical Sciences, 68(12), 1493–1501. https://doi.org/10.1093/gerona/glt047
Cheng, X., Guo, S., Liu, Y., Chu, H., Hakimi, P., Berger, N. A., Hanson, R. W., & Kao, H.-Y. (2013). Ablation of Promyelocytic Leukemia Protein (PML) Re-patterns Energy Balance and Protects Mice from Obesity Induced by a Western Diet. Journal of Biological Chemistry, 288(41), 29746–29759. https://doi.org/10.1074/jbc.M113.487595
Lassaletta, A. D., Elmadhun, N. Y., Liu, Y., Feng, J., Burgess, T. A., Karlson, N. W., Laham, R. J., & Sellke, F. W. (2013). Ethanol Promotes Arteriogenesis and Restores Perfusion to Chronically Ischemic Myocardium. Circulation, 128(11_suppl_1), S136–S143. https://doi.org/10.1161/CIRCULATIONAHA.112.000207
Koren, L., Elhanani, O., Kehat, I., Hai, T., & Aronheim, A. (2013). Adult Cardiac Expression of the Activating Transcription Factor 3, ATF3, Promotes Ventricular Hypertrophy. PLoS ONE, 8(7), e68396. https://doi.org/10.1371/journal.pone.0068396
Miller, B. F., Robinson, M. M., Reuland, D. J., Drake, J. C., Peelor, F. F., Bruss, M. D., Hellerstein, M. K., & Hamilton, K. L. (2013). Calorie Restriction Does Not Increase Short-term or Long-term Protein Synthesis. The Journals of Gerontology Series A: Biological Sciences and Medical Sciences, 68(5), 530–538. https://doi.org/10.1093/gerona/gls219
Lassaletta, A. D., Chu, L. M., Elmadhun, N. Y., Robich, M. P., Hoffman, Z. G., Kim, D. J., & Sellke, F. W. (2013). Mechanism for reduced pericardial adhesion formation in hypercholesterolemic swine supplemented with alcohol. European Journal of Cardio-Thoracic Surgery, 43(5), 1058–1064. https://doi.org/10.1093/ejcts/ezs488
Wang, H., Sreenivasan, U., Gong, D.-W., O’Connell, K. A., Dabkowski, E. R., Hecker, P. A., Ionica, N., Konig, M., Mahurkar, A., Sun, Y., Stanley, W. C., & Sztalryd, C. (2013). Cardiomyocyte-specific perilipin 5 overexpression leads to myocardial steatosis and modest cardiac dysfunction. The Journal of Lipid Research, 54(4), 953–965. https://doi.org/10.1194/jlr.M032466
Moghadaszadeh, B., Rider, B. E., Lawlor, M. W., Childers, M. K., Grange, R. W., Gupta, K., Boukedes, S. S., Owen, C. A., & Beggs, A. H. (2013). Selenoprotein N deficiency in mice is associated with abnormal lung development. The FASEB Journal, 27(4), 1585–1599. https://doi.org/10.1096/fj.12-212688
Al-Hasan, Y. M., Evans, L. C., Pinkas, G. A., Dabkowski, E. R., Stanley, W. C., & Thompson, L. P. (2013). Chronic Hypoxia Impairs Cytochrome Oxidase Activity Via Oxidative Stress in Selected Fetal Guinea Pig Organs. Reproductive Sciences, 20(3), 299–307. https://doi.org/10.1177/1933719112453509
Hoang, H. D., Prasain, J. K., Dorand, D., & Miller, M. A. (2013). A Heterogeneous Mixture of F-Series Prostaglandins Promotes Sperm Guidance in the Caenorhabditis elegans Reproductive Tract. PLoS Genetics, 9(1), e1003271. https://doi.org/10.1371/journal.pgen.1003271
Tungjai, M., Whorton, E. B., & Rithidech, K. N. (2013). Persistence of apoptosis and inflammatory responses in the heart and bone marrow of mice following whole-body exposure to 28Silicon (28Si) ions. Radiation and Environmental Biophysics, 52(3), 339–350. https://doi.org/10.1007/s00411-013-0479-4
Vedantham, V., Evangelista, M., Huang, Y., & Srivastava, D. (2013). Spatiotemporal regulation of an Hcn4 enhancer defines a role for Mef2c and HDACs in cardiac electrical patterning. Developmental Biology, 373(1), 149–162. https://doi.org/10.1016/j.ydbio.2012.10.017
Veltrop, M., van der Kaa, J., Claassens, J., van Vliet, L., Verbeek, S., & Aartsma-Rus, A. (2013). Generation of Embryonic Stem Cells and Mice for Duchenne Research. PLoS Currents. https://doi.org/10.1371/currents.md.cbf1d33001de80923ce674302cad7925
Hanstein, R., Negoro, H., Patel, N. K., Charollais, A., Meda, P., Spray, D. C., Suadicani, S. O., & Scemes, E. (2013). Promises and pitfalls of a Pannexin1 transgenic mouse line. Frontiers in Pharmacology, 4. https://doi.org/10.3389/fphar.2013.00061
Chen, H., Hwang, H., McKee, L. A. K., Perez, J. N., Regan, J. A., Constantopoulos, E., LaFleur, B., & Konhilas, J. P. (2013). Temporal and morphological impact of pressure overload in transgenic FHC mice. Frontiers in Physiology, 4. https://doi.org/10.3389/fphys.2013.00205
Chaker, B., Samra, T. A., Datta, N. S., & Abou-Samra, A. B. (2013). Altered Responses to Cold Environment in Urocortin 1 and Corticotropin-Releasing Factor Deficient Mice. Physiology Journal, 2013, 1–7. https://doi.org/10.1155/2013/185767
Leontieva, O. V., Paszkiewicz, G. M., & Blagosklonny, M. V. (2012). Mechanistic or mammalian target of rapamycin (mTOR) may determine robustness in young male mice at the cost of accelerated aging. Aging, 4(12), 899–916.
Austin, W. R., Armijo, A. L., Campbell, D. O., Singh, A. S., Hsieh, T., Nathanson, D., Herschman, H. R., Phelps, M. E., Witte, O. N., Czernin, J., & Radu, C. G. (2012). Nucleoside salvage pathway kinases regulate hematopoiesis by linking nucleotide metabolism with replication stress. Journal of Experimental Medicine, 209(12), 2215–2228. https://doi.org/10.1084/jem.20121061
Hecker, P. A., Mapanga, R. F., Kimar, C. P., Ribeiro, R. F., Brown, B. H., O’Connell, K. A., Cox, J. W., Shekar, K. C., Asemu, G., Essop, M. F., & Stanley, W. C. (2012). Effects of glucose-6-phosphate dehydrogenase deficiency on the metabolic and cardiac responses to obesogenic or high-fructose diets. AJP: Endocrinology and Metabolism, 303(8), E959–E972. https://doi.org/10.1152/ajpendo.00202.2012
Yang, J., & Xu, X. (2012). Actinin2 is required for the lateral alignment of Z discs and ventricular chamber enlargement during zebrafish cardiogenesis. The FASEB Journal, 26(10), 4230–4242. https://doi.org/10.1096/fj.12-207969
Kumar, M., Roe, K., Nerurkar, P. V., Namekar, M., Orillo, B., Verma, S., & Nerurkar, V. R. (2012). Impaired Virus Clearance, Compromised Immune Response and Increased Mortality in Type 2 Diabetic Mice Infected with West Nile Virus. PLoS ONE, 7(8), e44682. https://doi.org/10.1371/journal.pone.0044682

Intestine and stomach

Kidney and other urinary organs

Liver, pancreas and spleen

Lung

Li, M., Li, C., Song, S., Kang, H., Yang, D., & Li, G. (2016). Development and antigenic characterization of three recombinant proteins with potential for Glässer’s disease prevention. Vaccine, 34(19), 2251–2258. https://doi.org/10.1016/j.vaccine.2016.03.014
Adamo, R. F., Fishbein, I., Zhang, K., Wen, J., Levy, R. J., Alferiev, I. S., & Chorny, M. (2016). Magnetically enhanced cell delivery for accelerating recovery of the endothelium in injured arteries. Journal of Controlled Release, 222, 169–175. https://doi.org/10.1016/j.jconrel.2015.12.025
Bawadekar, M., Gendron-Fitzpatrick, A., Rebernick, R., Shim, D., Warner, T. F., Nicholas, A. P., Lundblad, L. K. A., Thompson, P. R., & Shelef, M. A. (2016). Tumor necrosis factor alpha, citrullination, and peptidylarginine deiminase 4 in lung and joint inflammation. Arthritis Research & Therapy, 18, 173. https://doi.org/10.1186/s13075-016-1068-0
Hajkova, K., Jurasek, B., Sykora, D., Palenicek, T., Miksatkova, P., & Kuchar, M. (2015). Salting-out-assisted liquid–liquid extraction as a suitable approach for determination of methoxetamine in large sets of tissue samples. Analytical and Bioanalytical Chemistry. https://doi.org/10.1007/s00216-015-9221-1
Ruhaak, L. R., Taylor, S. L., Stroble, C., Nguyen, U. T., Parker, E. A., Song, T., Lebrilla, C. B., Rom, W. N., Pass, H., Kim, K., Kelly, K., & Miyamoto, S. (2015). Differential N-Glycosylation Patterns in Lung Adenocarcinoma Tissue. Journal of Proteome Research, 14(11), 4538–4549. https://doi.org/10.1021/acs.jproteome.5b00255
Falendysz, E. A., Lopera, J. G., Lorenzsonn, F., Salzer, J. S., Hutson, C. L., Doty, J., Gallardo-Romero, N., Carroll, D. S., Osorio, J. E., & Rocke, T. E. (2015). Further Assessment of Monkeypox Virus Infection in Gambian Pouched Rats (Cricetomys gambianus) Using In Vivo Bioluminescent Imaging. PLOS Neglected Tropical Diseases, 9(10), e0004130. https://doi.org/10.1371/journal.pntd.0004130
McKenna, S., Gossling, M., Bugarini, A., Hill, E., Anderson, A. L., Rancourt, R. C., Balasubramaniyan, N., El Kasmi, K. C., & Wright, C. J. (2015). Endotoxemia Induces I B /NF- B-Dependent Endothelin-1 Expression in Hepatic Macrophages. The Journal of Immunology, 195(8), 3866–3879. https://doi.org/10.4049/jimmunol.1501017
Marien, E., Meister, M., Muley, T., Fieuws, S., Bordel, S., Derua, R., Spraggins, J., Van de Plas, R., Dehairs, J., Wouters, J., Bagadi, M., Dienemann, H., Thomas, M., Schnabel, P. A., Caprioli, R. M., Waelkens, E., & Swinnen, J. V. (2015). Non-small cell lung cancer is characterized by dramatic changes in phospholipid profiles: Altered Phospholipid Profiles in NSCLC. International Journal of Cancer, 137(7), 1539–1548. https://doi.org/10.1002/ijc.29517
Otsubo, C., Bharathi, S., Uppala, R., Ilkayeva, O. R., Wang, D., McHugh, K., Zou, Y., Wang, J., Alcorn, J. F., Zuo, Y. Y., Hirschey, M. D., & Goetzman, E. S. (2015). Long-chain Acylcarnitines Reduce Lung Function by Inhibiting Pulmonary Surfactant. Journal of Biological Chemistry, 290(39), 23897–23904. https://doi.org/10.1074/jbc.M115.655837
Rosen, D. A., Hilliard, J. K., Tiemann, K. M., Todd, E. M., Morley, S. C., & Hunstad, D. A. (2015). Klebsiella pneumoniae FimK Promotes Virulence in Murine Pneumonia. Journal of Infectious Diseases, jiv440. https://doi.org/10.1093/infdis/jiv440
Danan-Gotthold, M., Golan-Gerstl, R., Eisenberg, E., Meir, K., Karni, R., & Levanon, E. Y. (2015). Identification of recurrent regulated alternative splicing events across human solid tumors. Nucleic Acids Research, 43(10), 5130–5144. https://doi.org/10.1093/nar/gkv210
Kim, B. S., Serebreni, L., Fallica, J., Hamdan, O., Wang, L., Johnston, L., Kolb, T., Damarla, M., Damico, R., & Hassoun, P. M. (2015). Cyclin-Dependent Kinase Five Mediates Activation of Lung Xanthine Oxidoreductase in Response to Hypoxia. PLOS ONE, 10(4), e0124189. https://doi.org/10.1371/journal.pone.0124189
Caverly, L. J., Caceres, S. M., Fratelli, C., Happoldt, C., Kidwell, K. M., Malcolm, K. C., Nick, J. A., & Nichols, D. P. (2015). Mycobacterium abscessus Morphotype Comparison in a Murine Model. PLOS ONE, 10(2), e0117657. https://doi.org/10.1371/journal.pone.0117657
Diaz, J., Warren, L., Helfner, L., Xue, X., Chatterjee, P. K., Gupta, M., Solanki, M. H., Esposito, M., Bonagura, V., & Metz, C. N. (2015). Obesity shifts house dust mite-induced airway cellular infiltration from eosinophils to macrophages: effects of glucocorticoid treatment. Immunologic Research, 63(1–3), 197–208. https://doi.org/10.1007/s12026-015-8717-2
Khademi, S., Frye, M. A., Jeckel, K. M., Schroeder, T., Monnet, E., Irwin, D. C., Cole, P. A., Bell, C., Miller, B. F., & Hamilton, K. L. (2015). Hypoxia mediated pulmonary edema: potential influence of oxidative stress, sympathetic activation and cerebral blood flow. BMC Physiology, 15(1). https://doi.org/10.1186/s12899-015-0018-4
Hilliard, K. L., Allen, E., Traber, K. E., Kim, Y., Wasserman, G. A., Jones, M. R., Mizgerd, J. P., & Quinton, L. J. (2015). Activation of Hepatic STAT3 Maintains Pulmonary Defense during Endotoxemia. Infection and Immunity, 83(10), 4015–4027. https://doi.org/10.1128/IAI.00464-15
Tian, X., Liu, M., Su, X., Jiang, Z., Ma, Q., Liao, X., Li, X., Zhou, Z., Li, C., & Zhou, R. (2015). Mapping the epitope of neutralizing monoclonal antibodies against human adenovirus type 3. Virus Research, 208, 66–72. https://doi.org/10.1016/j.virusres.2015.06.002
Lopera, J. G., Falendysz, E. A., Rocke, T. E., & Osorio, J. E. (2015). Attenuation of monkeypox virus by deletion of genomic regions. Virology, 475, 129–138. https://doi.org/10.1016/j.virol.2014.11.009
Eriksson, A., Williams, M. J., Voisin, S., Hansson, I., Krishnan, A., Philippot, G., Yamskova, O., Herisson, F. M., Dnyansagar, R., Moschonis, G., Manios, Y., Chrousos, G. P., Olszewski, P. K., Frediksson, R., & Schiöth, H. B. (2015). Implication of coronin 7 in body weight regulation in humans, mice and flies. BMC Neuroscience, 16(1), 13. https://doi.org/10.1186/s12868-015-0151-9
Chen, G.-S., Huang, K.-F., Huang, C.-C., & Wang, J.-Y. (2015). Thaliporphine Derivative Improves Acute Lung Injury after Traumatic Brain Injury. BioMed Research International, 2015, 1–10. https://doi.org/10.1155/2015/729831
Zhang, Z., He, L., Hu, S., Wang, Y., Lai, Q., Yang, P., Yu, Q., Zhang, S., Xiong, F., Simsekyilmaz, S., Ning, Q., Li, J., Zhang, D., Zhang, H., Xiang, X., Zhou, Z., Sun, H., & Wang, C.-Y. (2015). AAL exacerbates pro-inflammatory response in macrophages by regulating Mincle/Syk/Card9 signaling along with the Nlrp3 inflammasome assembly. American Journal of Translational Research, 7(10), 1812–1825.
Hyatt, L. D., Wasserman, G. A., Rah, Y. J., Matsuura, K. Y., Coleman, F. T., Hilliard, K. L., Pepper-Cunningham, Z. A., Ieong, M., Stumpo, D. J., Blackshear, P. J., Quinton, L. J., Mizgerd, J. P., & Jones, M. R. (2014). Myeloid ZFP36L1 Does Not Regulate Inflammation or Host Defense in Mouse Models of Acute Bacterial Infection. PLoS ONE, 9(10), e109072. https://doi.org/10.1371/journal.pone.0109072
Rose, S. J., Neville, M. E., Gupta, R., & Bermudez, L. E. (2014). Delivery of Aerosolized Liposomal Amikacin as a Novel Approach for the Treatment of Nontuberculous Mycobacteria in an Experimental Model of Pulmonary Infection. PLoS ONE, 9(9), e108703. https://doi.org/10.1371/journal.pone.0108703
Miller, M., Rosenthal, P., Beppu, A., Mueller, J. L., Hoffman, H. M., Tam, A. B., Doherty, T. A., McGeough, M. D., Pena, C. A., Suzukawa, M., Niwa, M., & Broide, D. H. (2014). ORMDL3 Transgenic Mice Have Increased Airway Remodeling and Airway Responsiveness Characteristic of Asthma. The Journal of Immunology, 192(8), 3475–3487. https://doi.org/10.4049/jimmunol.1303047
Goetzman, E. S., Alcorn, J. F., Bharathi, S. S., Uppala, R., McHugh, K. J., Kosmider, B., Chen, R., Zuo, Y. Y., Beck, M. E., McKinney, R. W., Skilling, H., Suhrie, K. R., Karunanidhi, A., Yeasted, R., Otsubo, C., Ellis, B., Tyurina, Y. Y., Kagan, V. E., Mallampalli, R. K., & Vockley, J. (2014). Long-chain Acyl-CoA Dehydrogenase Deficiency as a Cause of Pulmonary Surfactant Dysfunction. Journal of Biological Chemistry, 289(15), 10668–10679. https://doi.org/10.1074/jbc.M113.540260
Bailey, K. L., Bonasera, S. J., Wilderdyke, M., Hanisch, B. W., Pavlik, J. A., DeVasure, J., Robinson, J. E., Sisson, J. H., & Wyatt, T. A. (2014). Aging causes a slowing in ciliary beat frequency, mediated by PKC. AJP: Lung Cellular and Molecular Physiology, 306(6), L584–L589. https://doi.org/10.1152/ajplung.00175.2013
Neely, C. J., Kartchner, L. B., Mendoza, A. E., Linz, B. M., Frelinger, J. A., Wolfgang, M. C., Maile, R., & Cairns, B. A. (2014). Flagellin Treatment Prevents Increased Susceptibility to Systemic Bacterial Infection after Injury by Inhibiting Anti-Inflammatory IL-10+ IL-12- Neutrophil Polarization. PLoS ONE, 9(1), e85623. https://doi.org/10.1371/journal.pone.0085623
Borschensky, C. M., & Reinacher, M. (2014). Mutations in the 3c and 7b genes of feline coronavirus in spontaneously affected FIP cats. Research in Veterinary Science, 97(2), 333–340. https://doi.org/10.1016/j.rvsc.2014.07.016
Goosen, W. J., Miller, M. A., Chegou, N. N., Cooper, D., Warren, R. M., van Helden, P. D., & Parsons, S. D. C. (2014). Agreement between assays of cell-mediated immunity utilizing Mycobacterium bovis-specific antigens for the diagnosis of tuberculosis in African buffaloes (Syncerus caffer). Veterinary Immunology and Immunopathology, 160(1–2), 133–138. https://doi.org/10.1016/j.vetimm.2014.03.015
Melero, M., García-Párraga, D., Corpa, J., Ortega, J., Rubio-Guerri, C., Crespo, J., Rivera-Arroyo, B., & Sánchez-Vizcaíno, J. (2014). First molecular detection and characterization of herpesvirus and poxvirus in a Pacific walrus (Odobenus rosmarus divergens). BMC Veterinary Research, 10(1), 968. https://doi.org/10.1186/s12917-014-0308-2
Ivanov, S. S., & Roy, C. R. (2013). Pathogen signatures activate a ubiquitination pathway that modulates the function of the metabolic checkpoint kinase mTOR. Nature Immunology, 14(12), 1219–1228. https://doi.org/10.1038/ni.2740
Yamamoto, K., Ahyi, A.-N. N., Pepper-Cunningham, Z. A., Ferrari, J. D., Wilson, A. A., Jones, M. R., Quinton, L. J., & Mizgerd, J. P. (2013). Roles of Lung Epithelium in Neutrophil Recruitment During Pneumococcal Pneumonia. American Journal of Respiratory Cell and Molecular Biology, 130906140418002. https://doi.org/10.1165/rcmb.2013-0114OC
Karauzum, H., Adhikari, R. P., Sarwar, J., Devi, V. S., Abaandou, L., Haudenschild, C., Mahmoudieh, M., Boroun, A. R., Vu, H., Nguyen, T., Warfield, K. L., Shulenin, S., & Aman, M. J. (2013). Structurally Designed Attenuated Subunit Vaccines for S. aureus LukS-PV and LukF-PV Confer Protection in a Mouse Bacteremia Model. PLoS ONE, 8(6), e65384. https://doi.org/10.1371/journal.pone.0065384
Chorny, M., Fishbein, I., Tengood, J. E., Adamo, R. F., Alferiev, I. S., & Levy, R. J. (2013). Site-specific gene delivery to stented arteries using magnetically guided zinc oleate-based nanoparticles loaded with adenoviral vectors. The FASEB Journal, 27(6), 2198–2206. https://doi.org/10.1096/fj.12-224659
Nakayama, K. H., Lee, C. C. I., Batchelder, C. A., & Tarantal, A. F. (2013). Tissue Specificity of Decellularized Rhesus Monkey Kidney and Lung Scaffolds. PLoS ONE, 8(5), e64134. https://doi.org/10.1371/journal.pone.0064134
Moghadaszadeh, B., Rider, B. E., Lawlor, M. W., Childers, M. K., Grange, R. W., Gupta, K., Boukedes, S. S., Owen, C. A., & Beggs, A. H. (2013). Selenoprotein N deficiency in mice is associated with abnormal lung development. The FASEB Journal, 27(4), 1585–1599. https://doi.org/10.1096/fj.12-212688
Al-Hasan, Y. M., Evans, L. C., Pinkas, G. A., Dabkowski, E. R., Stanley, W. C., & Thompson, L. P. (2013). Chronic Hypoxia Impairs Cytochrome Oxidase Activity Via Oxidative Stress in Selected Fetal Guinea Pig Organs. Reproductive Sciences, 20(3), 299–307. https://doi.org/10.1177/1933719112453509
Hoang, H. D., Prasain, J. K., Dorand, D., & Miller, M. A. (2013). A Heterogeneous Mixture of F-Series Prostaglandins Promotes Sperm Guidance in the Caenorhabditis elegans Reproductive Tract. PLoS Genetics, 9(1), e1003271. https://doi.org/10.1371/journal.pgen.1003271
Nichols, D. P., Caceres, S., Caverly, L., Fratelli, C., Kim, S. H., Malcolm, K., Poch, K. R., Saavedra, M., Solomon, G., Taylor-Cousar, J., Moskowitz, S., & Nick, J. A. (2013). Effects of azithromycin in Pseudomonas aeruginosa burn wound infection. Journal of Surgical Research, 183(2), 767–776. https://doi.org/10.1016/j.jss.2013.02.003
Rubio-Guerri, C., Melero, M., Esperón, F., Bellière, E., Arbelo, M., Crespo, J., Sierra, E., García-Párraga, D., & Sánchez-Vizcaíno, J. (2013). Unusual striped dolphin mass mortality episode related to cetacean morbillivirus in the Spanish Mediterranean sea. BMC Veterinary Research, 9(1), 106. https://doi.org/10.1186/1746-6148-9-106
Lee, J., Brehm, M. A., Greiner, D., Shultz, L. D., & Kornfeld, H. (2013). Engrafted human cells generate adaptive immune responses to Mycobacterium bovis BCG infection in humanized mice. BMC Immunology, 14(1), 53. https://doi.org/10.1186/1471-2172-14-53
Austin, W. R., Armijo, A. L., Campbell, D. O., Singh, A. S., Hsieh, T., Nathanson, D., Herschman, H. R., Phelps, M. E., Witte, O. N., Czernin, J., & Radu, C. G. (2012). Nucleoside salvage pathway kinases regulate hematopoiesis by linking nucleotide metabolism with replication stress. Journal of Experimental Medicine, 209(12), 2215–2228. https://doi.org/10.1084/jem.20121061
Hong, N., De-Xing, Q., Deng-Xiang, Z., & Long-Zhong, R. (2012). A Simple Cultural Method for Detection of Mycoplasma bovis. Journal of Animal and Veterinary Advances, 11(10), 1643–1646. https://doi.org/10.3923/javaa.2012.1643.1646
Kumar, M., Roe, K., Nerurkar, P. V., Namekar, M., Orillo, B., Verma, S., & Nerurkar, V. R. (2012). Impaired Virus Clearance, Compromised Immune Response and Increased Mortality in Type 2 Diabetic Mice Infected with West Nile Virus. PLoS ONE, 7(8), e44682. https://doi.org/10.1371/journal.pone.0044682
Sanderson, S. D., Thoman, M. L., Kis, K., Virts, E. L., Herrera, E. B., Widmann, S., Sepulveda, H., & Phillips, J. A. (2012). Innate Immune Induction and Influenza Protection Elicited by a Response-Selective Agonist of Human C5a. PLoS ONE, 7(7), e40303. https://doi.org/10.1371/journal.pone.0040303
Quinton, L. J., Mizgerd, J. P., Hilliard, K. L., Jones, M. R., Kwon, C. Y., & Allen, E. (2012). Leukemia Inhibitory Factor Signaling Is Required for Lung Protection during Pneumonia. The Journal of Immunology, 188(12), 6300–6308. https://doi.org/10.4049/jimmunol.1200256
El Agha, E., Al Alam, D., Carraro, G., MacKenzie, B., Goth, K., De Langhe, S. P., Voswinckel, R., Hajihosseini, M. K., Rehan, V. K., & Bellusci, S. (2012). Characterization of a Novel Fibroblast Growth Factor 10 (Fgf10) Knock-In Mouse Line to Target Mesenchymal Progenitors during Embryonic Development. PLoS ONE, 7(6), e38452. https://doi.org/10.1371/journal.pone.0038452
Adhikari, R. P., Karauzum, H., Sarwar, J., Abaandou, L., Mahmoudieh, M., Boroun, A. R., Vu, H., Nguyen, T., Devi, V. S., Shulenin, S., Warfield, K. L., & Aman, M. J. (2012). Novel Structurally Designed Vaccine for S. aureus α-Hemolysin: Protection against Bacteremia and Pneumonia. PLoS ONE, 7(6), e38567. https://doi.org/10.1371/journal.pone.0038567
Cavasin, M. A., Demos-Davies, K., Horn, T. R., Walker, L. A., Lemon, D. D., Birdsey, N., Weiser-Evans, M. C. M., Harral, J., Irwin, D. C., Anwar, A., Yeager, M. E., Li, M., Watson, P. A., Nemenoff, R. A., Buttrick, P. M., Stenmark, K. R., & McKinsey, T. A. (2012). Selective Class I Histone Deacetylase Inhibition Suppresses Hypoxia-Induced Cardiopulmonary Remodeling Through an Antiproliferative Mechanism. Circulation Research, 110(5), 739–748. https://doi.org/10.1161/CIRCRESAHA.111.258426
Konsavage, W. M., Zhang, L., Wu, Y., & Shenberger, J. S. (2012). Hyperoxia-induced activation of the integrated stress response in the newborn rat lung. AJP: Lung Cellular and Molecular Physiology, 302(1), L27–L35. https://doi.org/10.1152/ajplung.00174.2011

Lymphatic tissue

Membranous tissue

Muscles, ligaments and tendons

Oral tissues (including teeth)

Nasal tissues

Reproductive organs and tissues

Tumors and other pathological tissues